AMBER Archive (2007)

Subject: AMBER: Umbrella Sampling for the twist angle of a DNA base pairs

From: Catein Catherine (askamber23_at_hotmail.com)
Date: Wed May 30 2007 - 03:33:18 CDT

Dear All,

Did anyone got experiences on constructing a umbrella sampling for the twist
angle of a flanking DNA base pairs. Any suggestions for the angles of four
atoms or center of mass for two flanking base pairs?

Best regards
CAt

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