AMBER Archive (2007)

Subject: Re: AMBER: error in running sander

From: devrani mitra (devranimitra_at_gmail.com)
Date: Tue May 29 2007 - 16:27:09 CDT

Hello

I'm attaching the output file for the details. Hope this simplifies the things.

Thanks,
Devrani

On 5/29/07, Carlos Simmerling <carlos.simmerling_at_gmail.com> wrote:
> does your a_min_water.out file have any information in it?
>
> do the test cases pass?
>
> you need to give us much more information if you want help.
>
>
> On 5/29/07, devrani mitra <devranimitra_at_gmail.com> wrote:
> > Dear AMBER users,
> >
> > While running sander (for removing the bad contacts) following the
> > tutorials, I'm getting the following error message:
> >
> > >> sander -O -i a_min.in -p a.parm7 -c a.crd -r a_min.rst -o
> > a_min_water.out -ref a.rst
> >
> > p0_29153: p4_error: interrupt SIGSEGV: 11
> >
> > I'm not getting as which file do I need to correct. Please suggest.
> >
> > Thanks!
> > Devrani
> >
> > Devrani Mitra, UC Davis
> >
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>
>
>


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