AMBER Archive (2007)

Subject: Re: AMBER: error in running sander

From: Carlos Simmerling (carlos.simmerling_at_gmail.com)
Date: Tue May 29 2007 - 15:47:24 CDT

does your a_min_water.out file have any information in it?

do the test cases pass?

you need to give us much more information if you want help.

On 5/29/07, devrani mitra <devranimitra_at_gmail.com> wrote:
>
> Dear AMBER users,
>
> While running sander (for removing the bad contacts) following the
> tutorials, I'm getting the following error message:
>
> >> sander -O -i a_min.in -p a.parm7 -c a.crd -r a_min.rst -o
> a_min_water.out -ref a.rst
>
> p0_29153: p4_error: interrupt SIGSEGV: 11
>
> I'm not getting as which file do I need to correct. Please suggest.
>
> Thanks!
> Devrani
>
> Devrani Mitra, UC Davis
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