AMBER Archive (2007)

Subject: AMBER: crd to pdb conversion

From: AYTUG TUNCEL (ATUNCEL_at_ku.edu.tr)
Date: Mon Feb 19 2007 - 07:27:34 CST

Dear all,

Is there anyway converting the crd file to pdb format directly without the prmtop file. Because I used the ALASCAN in mm_pbsa module in order to create mutated residues but it requires new prmtop files for binding energy calculation. How can I create the new prmtop files for the corresponding structures that bear the mutated residues?Thanks in advance.

Aytug

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