AMBER Archive (2007)

Subject: AMBER: replacement of mutated atoms in protein structure

From: bertrand russell (betrussell23_at_gmail.com)
Date: Mon Feb 05 2007 - 04:42:37 CST

Dear AMBER users,

 I am trying to simulate a cytosolic doamin of a protein who's crystal
structure has been deposited in the PDB. The protein whicc I have taken is a
mutant one and I replaced some of its atoms to make it a wild type. And also
I built some of its missing residues. I have done minimisation of the built
residues before equilibrating the structure. My doubt is would my protein
behave as the wild type or as the mutated type? 

-- 
Live Life; Don't pass it
Bertrand.P.S.Russell
+91-9894398441

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