AMBER Archive (2006)

Subject: Re: AMBER: 'lastrst' error for amber8

From: Arvind Marathe (arvind_at_mbu.iisc.ernet.in)
Date: Mon Sep 18 2006 - 01:50:41 CDT

Also this is the entire output of:

#uname -a
Linux genomics 2.4.21-sgi240rp04080615_10094 #1 SMP Fri Aug 6 16:01:54 PDT
2004 ia64 unknown

I do not know of any command to check mpi version. This is what i found in
file /usr/include/mpi.h:
/* $Id: mpi.h,v 1.33 2003/07/18 02:47:20 tmiller Exp $ */

So does anyone have an idea of what's going wrong? Can anyone reproduce
the problem? Please write to me if any other info about the system is
required.

Arvind

> #ifort -V
> Intel(R) Fortran Itanium(R) Compiler for Itanium(R)-based applications
Version 9.0 Build 20060223 Package ID: l_fc_c_9.0.033
> Copyright (C) 1985-2006 Intel Corporation. All rights reserved. FOR
NON-COMMERCIAL USE ONLY
>
> #icc -V
> Intel(R) C Itanium(R) Compiler for Itanium(R)-based applications Version
9.0 Build 20051201 Package ID: l_cc_c_9.0.030
> Copyright (C) 1985-2005 Intel Corporation. All rights reserved. FOR
NON-COMMERCIAL USE ONLY
>
> earlier intel-8.0.056 compilers were used and they too could
successfully
> compile amber8. Since the later ones have been installed now, i used
these. In either case, 'lastrst' problem occurs.
>
> library: mkl-8.0.2
> again, earlier mkl-61 was used and both of them give no compilation
problems.
>
> The machine is sgi_altix, intel itanium processors.
>
> Arvind
>
> ps: amber9 jobs are running fine on the same machine.
>
>
>> On Sat, Sep 16, 2006, Arvind Marathe wrote:
>>> test.parallel gives the same 'lastrst' error at ./Run.tip4p.
>> What cpu and OS are you using, and which compiler (including compiler
> version)? You might as well add information about which MPI you used as
well, since I suppose that could be relevant. I don't think anyone has
ever
>> reported this sort of problem before.
>> ...dac
>> --
>> ==================================================================
David
> A. Case | e-mail: case_at_scripps.edu Dept. of
Molecular Biology, TPC15 | fax: +1-858-784-8896 The Scripps
Research Institute | phone: +1-858-784-9768 10550 N. Torrey
Pines Rd. | skype: dacase La Jolla CA 92037
USA
> | http://www.scripps.edu/case
> ==================================================================
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