AMBER Archive (2006)

Subject: Re: AMBER: Compiling AMBER 9 on windows XP using cygwin

From: Gustavo Seabra (gustavo.seabra_at_gmail.com)
Date: Fri Jul 07 2006 - 11:00:36 CDT

Did you try the tests? Did they work?

What kind of messages you get when trying to run tleap or xleap?

Gustavo.

On 7/7/06, Gobind Bisht <gsbisht1_at_gmail.com> wrote:
>
> Hi Gustavo,
> Thanx a lot! AMBER 9 did get installed but it's not
> recognising 'tleap' or 'xleap'. What could this be due to?Is it possible to
> open xleap from cygwin in windows?
> thanx a lot
> gobind
>
>
> On 7/7/06, Gustavo Seabra <gustavo.seabra_at_gmail.com> wrote:
> >
> > On 7/7/06, Gobind Bisht <gsbisht1_at_gmail.com> wrote:
> >
> > > Hi Emilio,
> > > I did install all the development tools/files as u told
> > > but after that it began giving some other problem and used only g95:
> > > after the command :make serial
> > > the following happened:
> > >
> > > --------------------------------------------------------------------------------------
> > >
> > > Starting installation of AMBER 9
> > > cd lib; make install
> > > make [1]:Entering directory 'home/user/amber9/src/lib'
> > > g95 -o new2oldparm.o nxtsec.o
> > > my new2oldparm.exe ../../exe
> > > /bin/rm _*.f
> > > /bin/rm: cannot remove '_*.f':nNo such file or directory
> > > make[1]: [instal] Error 1,ignore.
> > > make[1]: leaving directory..............................
> > > cd addles ; make install
> > > make[1]; make install
> > > make[1]: Entering directory '/home/user/amber9/src/addles'
> > > cd../lib; ./Makelist../lib/random.o../lib/mexit.o../lib/nxtsec.o
> > > /bin/sh:./Makelist :/bin/csh:bad interpreter: no such file or
> > > directory
> > >
> >
> > ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
> >
> > This error seems to indicate that you don't have the C-Shell installed.
> > Could you check that? (I think Cygwin does not install all shells by
> > default.)
> >
> > Gustavo.
> >
> >
>
>
>
> --
> Gobind Singh Bisht
> Btech II yr, Department Of Biotechnology
> IIT Kharagpur, Kharagpur-721302
> West Bengal,
>

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