AMBER Archive (2006)

Subject: AMBER: xleap problem

From: Hashem Taha (hashemt_at_gmail.com)
Date: Tue Jun 06 2006 - 13:29:31 CDT

i am trying to make prep file (from my pdb file) using xleap, but every time
i try to use 'saveAmberPrep unit file.prep' xleap says that it's saving the
prep file (saving prep, residue unit ...), but it just freezes at that point
and crashes. I have tried doing this on several computers, all of which gave
the same result. there were no errors in the unit after using 'check unit'
and all the connect points were set properly. There were also no error
messages given. I don't what is going on. any help is appreciated. the pdb
file of the molecule i am using is attached if needed.


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