AMBER Archive (2006)

Subject: Re: AMBER: amber 8 install problem

From: David A. Case (
Date: Mon Mar 13 2006 - 12:44:40 CST

On Mon, Mar 13, 2006, wrote:
> I want to install the amber on a opteron cluster.
> I have the pgf90-6.0 and get the new configure files for amber8.
> But there is a problem
> trace.o(.text+0x1ab): In function `trace_trace_enter_':
> : undefined reference to `wallclock_'

If you know a little bit about the how the linker works, you can
do "nm $AMBERHOME/src/lib/wallclock.o" to see what symbols wallclock.o
is exporting, then try to figure out how to get it to agree with what
pgf90 wants.

An alternative is to add -DF90_TIMER to your AMBERBUILDFLAGS (in config.h),
then recompile.

...good luck...dac

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