AMBER Archive (2006)

Subject: AMBER:

From: Steve Seibold (seibold_at_chemistry.msu.edu)
Date: Mon Mar 13 2006 - 08:17:41 CST

Hello Amber

I am attempting to do an example (Thiophenol) in the AMBER8 manual on
using Antechamber, but it is not working. It starts out ok and I get a
correct "tp.mol2" file, but my "frcmod" is incorrect, according to the
manual. According to the manual, I should have some parameters
missing, but in my "fcrmod" output, I do not. Can some one tell me what
I am doing wrong. I checked the AMBER mailing list and googled, but I
could not find anything relating to this problem.


  • application/octet-stream attachment: frcmod

  • application/octet-stream attachment: tp.pdb

  • application/octet-stream attachment: tp.mol2
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