AMBER Archive (2005)

Subject: Re: AMBER: | ERROR: Could not read coords from rst file

From: Robert Duke (rduke_at_email.unc.edu)
Date: Thu Dec 15 2005 - 21:14:35 CST

Zhang -
Does the combination of your command line input and files work for sander?
If not, then you are doing something not quite right. The "Could not read
coords" message corresponds to the inpcrd file (which may be a restrt from
the previous run, or an inpcrd from x/tleap). Are you specifying the
correct filename with a -c option flag? Are you specifying formatted input
for a formatted input file (ntx is an odd value in the mdin file &cntrl
namelist)? Even values of ntx specify binary input, which is trickier to
use (not sure that xleap will generate binary input, actually). If this all
does not answer your question, then we would need more information.
Regards - Bob Duke

----- Original Message -----
From: <Jiapu.Zhang_at_csiro.au>
To: <amber_at_scripps.edu>
Sent: Thursday, December 15, 2005 9:26 PM
Subject: AMBER: | ERROR: Could not read coords from rst file

> Hi, friends,
>
> In recent two weeks when I run Amber 8 pmemd, my work always meets a
> problem
>
> "| ERROR: Could not read coords from" rst file
>
> and my work is stopped. Please help a help if someone knows its reasons.
>
> Jiapu Zhang
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