AMBER Archive (2005)

Subject: Re: AMBER: (no subject)

From: mathew k varghese (mathew_kvarghese_at_yahoo.co.in)
Date: Thu Oct 20 2005 - 03:31:21 CDT

Hi

Thanks for your reply. I have tried nucgen. But I
actually want to modify a single base from an
experimental structure and some irregular nucleic
acids like bulges and loops

Thanks for any help

--- Yam <yamwaikeat_at_yahoo.com> wrote:

> hi.
>
> maybe you can try using nucgen to create your NA
> from
> the sequence that you wanted.
>
> regards.
>
>
> --- mathew k varghese <mathew_kvarghese_at_yahoo.co.in>
> wrote:
>
> > Dear AMBER users,
> >
> > Can you please suggest a software to manipulate
> > residues of a nucleic acid molecule (ie. to change
> > the
> > sequence manually).
> >
> > /\/\athew
> >
> > Mathew K Varghese
> > Research Scholar
> > School of Pure and Applied Physics
> > M.G.University
> > Kottayam, Kerala
> > India
> >
> > email mathew_kvarghese_at_yahoo.co.in
> >
> >
>
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> >
> >
> >
> >
>
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/\/\athew

Mathew K Varghese
Research Scholar
School of Pure and Applied Physics
M.G.University
Kottayam, Kerala
India

email mathew_kvarghese_at_yahoo.co.in

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