AMBER Archive (2005)

Subject: Re: AMBER: Simple 3D Molecule Visualization

From: Mingfeng Yang (mfyang_at_gmail.com)
Date: Wed Oct 19 2005 - 13:19:01 CDT

Why nobody recommended UCSF Chimera?
IMHO, it's the most user friendly and powerful visualizing software so far.
Noteworthy, it's very compatiable with AMBER data format.

Yang

Furse, Kristina Elisabet wrote:

>I'm a pretty big fan of DINO, myself. Might be worth a look.
>
>http://www.dino3d.org/
>
>Kristina
>
>
>
>>Quoting "Alec M. Resnick" <aresnick_at_mit.edu>:
>>
>>
>>
>>>So I figured that if anyone could provide an elegant software
>>>solution to this problem, AMBER users could. I've been searching for
>>>a simple program which can be used to create stylized, 3D ball and
>>>stick models from a set of coordinates (not too large at all).
>>>Additionally, I'd like to draw in the dipole vector. A high degree
>>>of customization would be ideal. What options might I have from
>>>which to choose?
>>>
>>>
>
>-----------------------------------------------------------------
>Kristina E. Furse
>Department of Chemistry
>Center for Structural Biology
>Vanderbilt University
>Email: kristina.e.furse_at_Vanderbilt.Edu
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