AMBER Archive (2005)

Subject: AMBER: antechamber + mopac failure

From: Nitin Bhardwaj (nbhardwaj_at_gmail.com)
Date: Thu Sep 15 2005 - 14:59:27 CDT

Hi,
   when i try to run antechamber to prepare a ".prepin" file using:

antechamber -i sus.pdb -fi pdb -o sustiva.prepin -fo prepi -c bcc -s 2

I get:

Running:
 /disk11/amber7/exe/mopac.sh ANTECHAMBER_MUL.MOP ANTECHAMBER_MUL.OUT

Unable to find mopac charges in ANTECHAMBER_MUL.OUT

When i remove the "-c bcc" option in the command it works fine but
it assigns weird a charge of 0 to all the atoms in the prepin file.

Where am i going wrong?

I am new to amber so a detailed answer would be appreciated.
Thaks a lot in advance.
Nitin
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