AMBER Archive (2005)

Subject: AMBER: calculating hydrogen bonds

From: Vijay Manickam Achari (vjrajamany_at_yahoo.com)
Date: Tue Jun 28 2005 - 21:50:36 CDT

Dear amber users,

I have used ptraj to calculate hydrogen bond between
residues of my micelle structure.
I have got the output file. How do I do the
calculattion to get the hydrogen bond between defined
atoms in my residues?
For view I attached the output file.

Can any one show and help me how to calculate that
value?

Thanks.

Vijay

                
___________________________________________________________
How much free photo storage do you get? Store your holiday
snaps for FREE with Yahoo! Photos http://uk.photos.yahoo.com

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu