AMBER Archive (2005)

Subject: Re: AMBER: how to pull out frames

From: Husni Fattayer (fatayer78_at_yahoo.com)
Date: Mon Jun 13 2005 - 06:22:40 CDT

Hi Vijay,

you can do that (delete certain frames) using VMD too,
first u need to read the topology and coordinate files
into vmd, and after that u can delete any frame u
want. u should have the number of that frame handy.

H. Fattayer

--- Vijay Manickam Achari <vjrajamany_at_yahoo.com>
wrote:

> Dear amber users,
>
> I have simulated micelle structure in explicit water
> for 5 nano second.
>
> When I observe in VMD I noticed one residue strip
> out
> from the structure and get back to the structure
> again.
>
> Here I would like to erase the frame where the
> residue
> flip out from the structure. How and what I should
> in
> order to delete some of the unwanted frames?
>
> Thank you
> Vijay
>
>
>
>
>
>
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