AMBER Archive (2005)

Subject: AMBER: question whem using leap

From: du yongchun (phoebus2008_at_hotmail.com)
Date: Thu Jun 02 2005 - 02:25:16 CDT

hi,amber
   In leap I can load a protein peptide which was dowload in amber tutoril
2
(http://www.rosswalker.co.uk/tutorials/amber_workshop/Tutorial_two/index.htm)
and then I get the top file and crd file .But later I use VMD to load them
,it become very strange.Surely I load top file as parm7 format and then
load crd file as crd format.There are much more differnces comparing with
the image I load ser.pdb straightly.Can you tell me why and how to modify
it?
Thanks !
                                          du
                                          2005.6.2

_________________________________________________________________
Ãâ·ÑÏÂÔØ MSN Explorer: http://explorer.msn.com/lccn

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu