AMBER Archive (2005)

Subject: AMBER: question about initial conditions for amber

From: Ed Pate (pate_at_math.wsu.edu)
Date: Sun May 29 2005 - 21:42:21 CDT

Amber community:

I have a question about the initial conditions that are used for an Amber
molecular dynamics simulation. The molecule structure gives you the
initial position. Is the initial velocity for each atom assumed to be
zero, or is it taken from some distribution?

Thank you for your help.

Ed Pate

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu