AMBER Archive (2005)

Subject: AMBER: how to reduce box size and delete excess solvent

From: hj zou (hjzou_at_iris3.simm.ac.cn)
Date: Sun May 15 2005 - 06:51:32 CDT

Dear amber users:
  I would like to reduce the size of the bounding box (periodic BC) and delete all solvents which don't fit inside new box. How to achieve it? Can anyone furnish a script?
  Your suggestions will be highly appreciated.

                        
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Hanjun Zou
555 Zu Chong Zhi Road, Zhangjiang Hi-Tech Park
Drug Discovery and Design Center
Shanghai Institute of Meteria Medica
Chinese Academy of Sciences
Shanghai 201203, China
Tel£º +86-21-50806600-1201
E-mail: hjzou_at_mail.shcnc.ac.cn
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