AMBER Archive (2005)

Subject: AMBER: mean structure calculation

From: mmv (mmv_at_whu.edu.cn)
Date: Fri Apr 22 2005 - 04:17:20 CDT

Dear Amber usrs,

Recently I performed a 10ns MD simulation.
Now I try to calculta the mean structure of all the 20,000 structures
over the last 4 ns.
I don`t consider it`s a smart way to produce pdb files one by one then
analyse them all.

How can I do this by ptraj commands?

Thank you in advence!
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu