AMBER Archive (2005)

Subject: AMBER: spherical boundary condition

From: Hui-Hsu Tsai (tsaih_at_ncifcrf.gov)
Date: Sat Mar 12 2005 - 13:05:52 CST

Dear Amber users,

I am trying to setup GB simulation of multiple peptides.
I would like to use a spherical boundary condition to "restraint"
peptides in a limited spherical space.

I go through the Amber 8 manual, but did not find any hint.
It seems this problem has been asked in amber mailing list before,
however, I can not find the clear solution.
Could someone have experience on this problem give me some hints?
Any suggest is appreicated. Thanks.

Gavin

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