AMBER Archive (2005)Subject: Re: AMBER: eedmeth=5
From: David A. Case (case_at_scripps.edu)
Date: Sat Jan 22 2005 - 12:20:22 CST
On Fri, Jan 21, 2005, Lihua Wang wrote:
>
> I was using the flag eedmeth=5 to carry out a non-periodic calculations.
> In the amber8 manual, it states that weh eedmeth=5, the distance
> dependence is 1/r2 (1 over r squared) rather than 1/r.
>
> However, in Section 4 (the Result section) of the .mdout file i obtained,
> it stated that eedmeth=5: Using 1/r dielectric.
>
> I am wondering what is actually used, 1/r2 or 1/r dielectric.
A "1/r dielectric" means the same thing as "the distance dependence is 1/r2".
...dac
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