AMBER Archive (2004)

Subject: AMBER: Question about Amino acid mutations

From: sachin patil (sachin_ppatil_at_yahoo.com)
Date: Wed Oct 13 2004 - 18:03:22 CDT

Dear Amber Users,
 I am trying to mutate a few residues in my protein
and
carry out Free energy perturbation studies.
 At this time I came across and a question and its
answer at the "Selected Responsed section on the Amer
website."
Date: Tue, 28 Oct 2003 18:38:00 -0200
From: Osmar Norberto de Souza
Subject: Re: AMBER: aminoacid mutation
 It is about using Swisspdb viewer for mutating amino
acid residues. Now my question is after mutating the
desired amino acids and making a pdb file how one can
use it for Free Energy Calculation with Gibbs?
 Any suggestions, comments would be hightly
appreciated.

Thanks in advance
Sachin
 

                
_______________________________
Do you Yahoo!?
Declare Yourself - Register online to vote today!
http://vote.yahoo.com
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu