AMBER Archive (2004)

Subject: AMBER: mm_pbsa nmode problem

From: Fang, Jianwen (jwfang_at_ku.edu)
Date: Fri Sep 17 2004 - 17:28:47 CDT

Dear all,
could anybody please let me know I can consider residues within some
distance (12 A) from ligand when I do nmode calculation using
mm_pbsa.pl? Junmei Wang's 2001 JACS paper mentioned the approach but
did not give details.
Thanks in advance!
--Jianwen
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