AMBER Archive (2004)

Subject: Re: AMBER: (no subject)

From: ThuZar Lwin (tzwlwin_at_yahoo.com)
Date: Tue Feb 17 2004 - 15:33:30 CST

How about EGB, EHBOND, EELEC, EAMBER(non-constraint),
CONSTRAINT, RESTRAINT?

I could not find these abbreviations in the manual.
Do we have to play with clues? Shouldn't there be a
place an amber user can refer to?

Thanks in advance,
Tz

--- Bill Ross <ross_at_cgl.ucsf.edu> wrote:
> > EKtot, EPtot, BOND, DIHED, etc. Is there a place
> in
> > the manual that explains what each of these
> > abbreviations means?
>
> In case the abbreviations are not explained in the
> manual,
> here are some clues:
>
> EK = kinetic energy
> EP = potential energy
> tot = total
> BOND = bond
> DIHED = dihedral
> EELC = electrostatic potential energy
>
>
>
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