AMBER Archive (2003)

Subject: Re: AMBER: mpprun: exec of '/usr/local/bin/sander7.0' failed: Not enough space

From: David A. Case (case_at_scripps.edu)
Date: Tue Aug 26 2003 - 20:32:20 CDT

On Tue, Aug 26, 2003, zhaoxc_at_puccini.che.pitt.edu wrote:
>
> I got this when I run a test run using sander7 on the CrayT3E at PSC using
> 16 processors:
>
> mpprun: exec of '/usr/local/bin/sander7.0' failed: Not enough space

This is referring to physical memory, not disk space. You can use the "size"
command to see how much static memory is being used. You will probably need
to edit the sizes.h file to use less memory -- T3E's are very tight on
memory, and there is a limit (someone else on the list probably knows about
what this is) for how big a system can be handled there.

..good luck...dac 

-- 

==================================================================
David A. Case                     |  e-mail:      case_at_scripps.edu
Dept. of Molecular Biology, TPC15 |  fax:          +1-858-784-8896
The Scripps Research Institute    |  phone:        +1-858-784-9768
10550 N. Torrey Pines Rd.         |  home page:                   
La Jolla CA 92037  USA            |    http://www.scripps.edu/case
==================================================================
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber_at_scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo_at_scripps.edu