AMBER Archive (2003)

Subject: Re: AMBER: xleap memory issue

From: David A. Case (case_at_scripps.edu)
Date: Tue Aug 26 2003 - 20:25:29 CDT

On Tue, Aug 26, 2003, Terry Downing wrote:
>
> I am trying to use xleap to load charges onto a portion of the
> ribosome....

Do you mean "a really, really small portion of the ribosome"? :-)

As Bill Ross said, you can try to get more memory by checking your limits,
or find a machine with more physical memory. But you may have to do this
in pieces...LEaP is not especially frugal about memory -- how many atoms
is in your system?

..regards...dac 

-- 

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David A. Case                     |  e-mail:      case_at_scripps.edu
Dept. of Molecular Biology, TPC15 |  fax:          +1-858-784-8896
The Scripps Research Institute    |  phone:        +1-858-784-9768
10550 N. Torrey Pines Rd.         |  home page:                   
La Jolla CA 92037  USA            |    http://www.scripps.edu/case
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