AMBER Archive (2003)

Subject: Problem in separating LES copies into different trajectory

From: Sameer P. Kawatkar (kawatkar_at_chem.uga.edu)
Date: Tue Jun 10 2003 - 10:15:18 CDT

Hi,
I am using Moil-view 10.1 version to analyse LES-MD similation of a
disaccharide in water. I have three copies of atoms which form phi and psi
angle. While separating the copies into three different trajectories, I
used command
pick #mon 1 3 & #cop 0 1 done

It separated first copy properly but for second copy I used

pick #mon 1 3 & #cop 0 2 done

Although it created a trajectory but it counted first and second copy
instead of just second copy.
If I want to make all the copies into different trajectories, is there any
way to do this whith moilview or any other technique?
Please guide me in this regards.

Sameer