AMBER Archive (2003)

Subject: sander outputs

From: S.Swaminathan (swamy_at_www.cdfd.org.in)
Date: Fri Mar 28 2003 - 13:47:18 CST

Hi All,

How to convert the energy minimised output of "sander"
into a pdb format ?

This is essential, when we need to carry out secondary
structure predictions. Such kind of programs generally
a accept an input file in pdb format.

Swaminathan

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S.Swaminathan
Technical Officer - Bioinformatics
Centre for DNA Fingerprinting & Diagnostics (CDFD)
ECIL Road, Nacharam,
Hyderabad - 500 076
Tel: 27151344,346 Extn. 1207/1208
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