AMBER Archive (2002)

Subject: a leap question

From: Vlad Cojocaru (Vlad.Cojocaru_at_mpi-bpc.mpg.de)
Date: Thu Oct 17 2002 - 08:20:23 CDT

Dear Amber users,
   First of all I am sorry if my questions sometimes are trivial and
maybe I can find the answers easy looking in the archive. I hope I did
not bother anybody. I think the list is less time consuming for finding
these answers. Please if you do not find time for short answers just
throw the emails to trash.

  Ok I have a question about leap:
  Is there a way in leap to load at once a bunch of pdbs and to save the
topology and coordinate files? Something like foreach loop? If somebody
knows how to do that could you please give me some hints. I tried with a
shell script
but I couldn't pass variables from the shell to leap.

  All the replies are highly appreciated,
Best wishes,
vlad 

-- 
Vlad Cojocaru 
Max Planck Institut for Biophysical Chemistry 
Deparment: 060 
Am Fassberg 11, 37077 Goettingen, Germany 
tel: ++49-551-201.1389 
e-mail: Vlad.Cojocaru_at_mpi-bpc.mpg.de