AMBER Archive (2002)

Subject: Truncated Octahedron Box

From: giudice (giudice_at_ibpc.fr)
Date: Thu Oct 17 2002 - 08:06:28 CDT


 
Dear amberusers,

I'm using a truncated octahedron box (TOB) to solvate my system.
At the end of the topology file I have four parameters for the box:
1 Angle and 3 distances (which are equal in my case because of the Iso
option)

my question is how those parameter are related to the TOB ?
Can -I recreate a virtual empty (no water) box using those parameters ?
regards,

Emmanuel

-- 
Emmanuel Giudice 
Laboratoire de Biochimie Theorique,CNRS UPR 9080 
Institut de Biologie Physico - Chimique 
13, Rue Pierre & Marie CURIE 75005  PARIS

Tel-labo : 01.58.41.51.75 Tel-perso : 06.88.73.01.13

Email : Emmanuel.Giudice_at_ibpc.fr