AMBER Archive (2002)Subject: Re: literature for NVE
From: David A. Case (case_at_scripps.edu)
Date: Mon Aug 12 2002 - 10:38:45 CDT
On Mon, Aug 12, 2002, Khatcharin Siriwong wrote:
>
> Could anyobe let me know the literature which describe about using Amber
> with NVE ensemble? I would like to know why people use NVE, in stead of
> NPT.
>
People mostly use NVE when they are interested in the dynamical behavior
of the system, since thermostats and pressure pistons distort the dynamics (to
some extent).
..dac
--
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David A. Case | e-mail: case_at_scripps.edu
Dept. of Molecular Biology, TPC15 | fax: +1-858-784-8896
The Scripps Research Institute | phone: +1-858-784-9768
10550 N. Torrey Pines Rd. | home page:
La Jolla CA 92037 USA | http://www.scripps.edu/case
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