AMBER Archive (2002)

Subject: Mn parameters!!!

From: navjot_at_bioinfo.ernet.in
Date: Mon Jun 17 2002 - 04:19:12 CDT

Respected sir;

i am facing problem in assigning
potentials to the manganase atoms which are not part of amber, cvff,ff91
forcefields.i need to use cvff forcefield for the docking studies.i have
come across papers where people have represented Mn atoms in terms of its
molecular mass and vanderwaal's radius in the amber forcefield.i am
looking fwd to soln. of my problem.
good day!!!
Ms navjyot