AMBER Archive (2002)

Subject: Amber tutorial

From: rino ragno (rino.ragno_at_uniroma1.it)
Date: Sat Jun 15 2002 - 04:53:53 CDT

Hi there,

I am looking for an AMBER tutorial for dummies. What I look exactly for
is a basic tutorial to set up the minimization of a protein/ligand
experimental or modeled complex. Take in mind that the ligand could be
of any chemical nature so the amber protein parameter could be
unsuitable. Is there any utility to set up some good AMBER parameter for
organic compounds and prepare the input file?

Thank you very much.

Rino

P.S. I have version 6 of AMBER.
++-------------------------------------------------------++
|| Dr. Rino Ragno ||
|| Dip. Studi Chimica Tecnonologia Sostanze ||
|| Biologicamente Attive ||
|| Facolta' di Farmacia - Universita' "La Sapienza" ||
|| P.le Aldo Moro, 5 - 00185 - Roma/Italia ||
|| ||
|| Phone: 39-6-49913152 ||
|| ||
|| Fax: 39-6-233206910 (Roma-IT) 1-503-905-9119 (US) ||
|| ||
|| E-mail: rino.ragno_at_uniroma1.it (work) ||
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