AMBER Archive (2002)

Subject: Re: Topology file format in AMBER 7

From: David Case (case_at_scripps.edu)
Date: Tue May 14 2002 - 16:33:15 CDT

On Tue, May 14, 2002, Joffre Heredia wrote:
>
> We're making tests with AMBER 7 and we have realised that our old
> topology files from AMBER 5/6 made with link/edit/parm don't work under
> AMBER 7. In the manual we read that both old and new formats should be
> properly read. Is there any conflict between link/edit/parm topology files
> and AMBER 7 ?

There should not be conflicts, except for GB runs, where sander now
requires the new format. Can you provide information about what you are
trying to do that doesn't work?

....dac 

-- 

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David A. Case                     |  e-mail:      case_at_scripps.edu
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