AMBER Archive (2001) - Jul 2001 By Subject

114 messages sorted by: [ author ] [ date ] [ thread ]
About this archive

Starting: Mon Jul 02 2001 - 07:21:00 CDT
Ending: Tue Jul 31 2001 - 18:22:21 CDT

(no subject)
- Sue Heavner (Fri Jul 06 2001 - 12:08:38 CDT)
- Michal Otyepka (Wed Jul 04 2001 - 12:20:54 CDT)
[charmm-bbs] Post-doctoral position available
- Chris Chipot (Mon Jul 23 2001 - 18:32:19 CDT)
A request regarding AMBER postings with attached files
- Anita Ilze Zvaigzne (Tue Jul 24 2001 - 05:18:42 CDT)
A request regarding AMBER postings with attached files (fwd)
- Andrew Gordon Purkiss (Tue Jul 24 2001 - 06:14:29 CDT)
About Delphi...
- backy_at_ibms.sinica.edu.tw (Wed Jul 25 2001 - 22:42:10 CDT)
about ion concentration in protein simulation
- Bill Ross (Wed Jul 11 2001 - 17:49:27 CDT)
- Shixiang Yan (Wed Jul 11 2001 - 08:48:16 CDT)
Adding ions in xleap
- Yuguang Mu (Fri Jul 27 2001 - 01:25:38 CDT)
ADDING IONS USING EDIT
- A.Madhumalar (Sat Jul 14 2001 - 12:54:31 CDT)
addions
- tianxiao young (Thu Jul 12 2001 - 21:55:38 CDT)
addles
- Carlos Simmerling (Thu Jul 05 2001 - 06:38:25 CDT)
- Guanglei Cui (Wed Jul 04 2001 - 09:11:51 CDT)
- Eoin Galligan (Wed Jul 04 2001 - 08:18:59 CDT)
Amber 6
- Luckhana (Fri Jul 06 2001 - 13:23:35 CDT)
AMBER box
- Carlos Simmerling (Thu Jul 19 2001 - 06:24:35 CDT)
- dkon_at_email.arizona.edu (Wed Jul 18 2001 - 18:20:00 CDT)
Amber installation
- Miguel Cabrera Fuentes (Fri Jul 20 2001 - 13:47:35 CDT)
Amber installation on linux
- Miguel Cabrera Fuentes (Sat Jul 21 2001 - 18:13:59 CDT)
amber5 and 77000 atoms ...
- A. Ababou (Wed Jul 04 2001 - 13:20:38 CDT)
- A. Ababou (Wed Jul 04 2001 - 10:36:16 CDT)
amber5/6
- Bill Ross (Fri Jul 06 2001 - 15:18:23 CDT)
Announcing PyMOL v0.56 (+ Windows Installer)
- DeLano, Warren (Wed Jul 18 2001 - 14:14:45 CDT)
beginners problem (fwd)
- jim caldwell (Mon Jul 30 2001 - 10:16:28 CDT)
block attachments?
- Anita Ilze Zvaigzne (Tue Jul 24 2001 - 10:06:07 CDT)
- Jake Isaacs (Tue Jul 24 2001 - 08:22:46 CDT)
box information
- Giulio Rastelli (Tue Jul 31 2001 - 12:39:29 CDT)
C DNA MONOMER UNITS
- A.Madhumalar (Tue Jul 03 2001 - 02:38:11 CDT)
CCl4 ESP Grid problem with jaguar
- GUILBAUD Philippe 153683 (Thu Jul 05 2001 - 04:09:07 CDT)
CCl4 ESP Grid problem with jaguar | 010628a (fwd)
- Bayly, Christopher (Wed Jul 04 2001 - 10:50:19 CDT)
- jim caldwell (Tue Jul 03 2001 - 14:38:21 CDT)
constraining hydrogen bonds
- Bill Ross (Sun Jul 22 2001 - 17:50:24 CDT)
- Guanglei Cui (Sun Jul 22 2001 - 11:02:45 CDT)
- A.Madhumalar (Sun Jul 22 2001 - 10:19:02 CDT)
Creating capped peptides with AMBER
- John Finke (Tue Jul 10 2001 - 19:41:28 CDT)
DelPhi's manual
- Andreas Svrcek-Seiler (Thu Jul 26 2001 - 06:55:11 CDT)
- Xiaolin Chuang (Wed Jul 25 2001 - 12:37:04 CDT)
dipolar couplings
- Richard Stefl (Mon Jul 16 2001 - 07:30:07 CDT)
dissociation of protein from DNA in MD
- David Case (Sat Jul 21 2001 - 15:15:13 CDT)
- Michael Cooney (Sat Jul 21 2001 - 14:50:27 CDT)
equilibriating LES
- Carlos Simmerling (Thu Jul 19 2001 - 06:22:54 CDT)
- Eoin Galligan (Thu Jul 19 2001 - 05:27:55 CDT)
Essential Dynamics
- Sanjeev B.S. (Sun Jul 15 2001 - 10:48:12 CDT)
ewald bomb in amber 6
- David Konerding (Fri Jul 13 2001 - 17:07:41 CDT)
- Thomas Cheatham (Fri Jul 13 2001 - 16:51:42 CDT)
- Michael Crowley (Fri Jul 13 2001 - 13:38:23 CDT)
- Sanjeev B.S. (Fri Jul 13 2001 - 13:30:38 CDT)
- David Konerding (Fri Jul 13 2001 - 09:28:30 CDT)
- Todd J. Minehardt (Fri Jul 13 2001 - 09:21:50 CDT)
gamess X resp : Conclusions. (fwd)
- jim caldwell (Thu Jul 05 2001 - 12:17:50 CDT)
gibbs_restrt
- jim caldwell (Mon Jul 02 2001 - 12:02:22 CDT)
- Olga Carvalho (Mon Jul 02 2001 - 07:21:00 CDT)
Help with Leap!
- Bill Ross (Mon Jul 09 2001 - 19:34:52 CDT)
- Dat H. Nguyen (Mon Jul 09 2001 - 19:17:58 CDT)
high density spot
- Guanglei Cui (Mon Jul 02 2001 - 09:49:30 CDT)
histidines normal-modes
- Jones de Andrade (Thu Jul 12 2001 - 09:04:23 CDT)
Hritz
- Jozef Hritz (Tue Jul 03 2001 - 06:58:18 CDT)
hybridization
- tianxiao young (Tue Jul 24 2001 - 09:10:55 CDT)
installing amber6
- Bill Ross (Tue Jul 17 2001 - 13:18:06 CDT)
- UMEMOTO, Kimiko (Tue Jul 17 2001 - 03:37:13 CDT)
Internal Restraints in Sander Problem
- Bill Ross (Wed Jul 11 2001 - 17:40:55 CDT)
- Manoj Cheriyan (Wed Jul 11 2001 - 17:19:31 CDT)
Intprt in PMF calculations
- Ulf Ryde (Mon Jul 23 2001 - 06:18:57 CDT)
is parm98 the same as parm99? (fwd)
- jim caldwell (Tue Jul 31 2001 - 09:59:54 CDT)
limit the distance
- Zhangxd (Mon Jul 02 2001 - 15:13:08 CDT)
MD run with constantly decreasing total energy (fwd)
- Andreas Svrcek-Seiler (Mon Jul 30 2001 - 04:06:55 CDT)
- jim caldwell (Sun Jul 29 2001 - 21:28:36 CDT)
Npairs Exceeds Max
- Anton B. Guliaev (Mon Jul 23 2001 - 12:37:48 CDT)
nucgen
- Xiaolin Chuang (Thu Jul 05 2001 - 07:06:39 CDT)
Parameters for phosphonate available?
- Gudrun Schuerer (Thu Jul 12 2001 - 08:27:46 CDT)
parm94
- eric arnoult (Fri Jul 13 2001 - 07:40:20 CDT)
parm99
- Giulio Rastelli (Thu Jul 19 2001 - 06:01:41 CDT)
Post-doctoral position available
- Chris Chipot (Mon Jul 23 2001 - 18:32:19 CDT)
potentials
- tianxiao young (Tue Jul 17 2001 - 21:58:28 CDT)
problem in xleap
- schayg_at_puskin-a206.sote.hu (Wed Jul 11 2001 - 17:25:18 CDT)
- schayg_at_puskin-a206.sote.hu (Wed Jul 11 2001 - 17:25:18 CDT)
- Bill Ross (Wed Jul 11 2001 - 11:30:08 CDT)
- Harshit Patel (Wed Jul 11 2001 - 10:13:56 CDT)
- Monica (Tue Jul 10 2001 - 22:51:18 CDT)
- Monica (Tue Jul 10 2001 - 22:51:18 CDT)
- Monica (Mon Jul 09 2001 - 01:47:48 CDT)
Problem with
- Dat H. Nguyen (Tue Jul 31 2001 - 18:22:21 CDT)
problem with xleap and sander! (fwd)
- jim caldwell (Mon Jul 30 2001 - 13:56:23 CDT)
ptraj diffusion
- Thomas Cheatham (Thu Jul 12 2001 - 14:15:46 CDT)
- dkon_at_email.arizona.edu (Thu Jul 12 2001 - 13:32:38 CDT)
ptraj to re-associate protein+DNA
- Michael Cooney (Wed Jul 25 2001 - 16:34:29 CDT)
ptraj: principal axes
- Thomas C. Bishop (Wed Jul 18 2001 - 08:23:30 CDT)
question
- Zhangxd (Thu Jul 19 2001 - 09:05:18 CDT)
Question...
- backy_at_ibms.sinica.edu.tw (Tue Jul 24 2001 - 00:57:56 CDT)
Request
- r ojha (Wed Jul 11 2001 - 13:06:23 CDT)
restarting gibbs (fwd)
- jim caldwell (Tue Jul 31 2001 - 10:00:25 CDT)
rigid body motion
- Sanjeev B.S. (Wed Jul 25 2001 - 11:00:00 CDT)
- dkon_at_email.arizona.edu (Mon Jul 23 2001 - 12:20:27 CDT)
sander minimization problems with igb=3, ntb =0
- Todd J. Minehardt (Mon Jul 16 2001 - 08:28:46 CDT)
shared memory
- Daniel GENEST (Fri Jul 06 2001 - 11:33:10 CDT)
- David Konerding (Fri Jul 06 2001 - 11:26:43 CDT)
simulating membranes with AMBER
- Thomas Huber (Tue Jul 31 2001 - 13:54:38 CDT)
simulating membranes with AMBER (fwd)
- jim caldwell (Mon Jul 30 2001 - 10:16:06 CDT)
solvation energy calculation
- Andreas Svrcek-Seiler (Thu Jul 26 2001 - 07:10:27 CDT)
- Xiaolin Chuang (Thu Jul 26 2001 - 04:12:07 CDT)
- samantha hughes (Thu Jul 26 2001 - 01:54:11 CDT)
spam
- jim caldwell (Tue Jul 24 2001 - 16:11:45 CDT)
stop COM motions in AMBER 5.0.1 question
- David Case (Mon Jul 09 2001 - 10:06:21 CDT)
Structure with coordinates of C-alpha atoms only
- Jung-Hsing Lin (Thu Jul 05 2001 - 21:23:48 CDT)
trajectory analysis
- Carlos Simmerling (Tue Jul 24 2001 - 14:22:24 CDT)
- Andreas Svrcek-Seiler (Tue Jul 24 2001 - 14:00:59 CDT)
- Bill Ross (Tue Jul 24 2001 - 13:48:54 CDT)
- dkon_at_email.arizona.edu (Tue Jul 24 2001 - 13:15:31 CDT)
Trosion parameters
- Eric ARNOULT (Wed Jul 25 2001 - 03:34:25 CDT)
vdW parameters for our friend, vanadium (fwd)
- jim caldwell (Mon Jul 30 2001 - 13:54:33 CDT)
vdw parameters for:THR-HG1, TYR-HH
- Omer Katzenelson (Mon Jul 02 2001 - 20:49:27 CDT)
water cap
- Michael Cooney (Wed Jul 25 2001 - 12:27:54 CDT)
- Guanglei Cui (Tue Jul 24 2001 - 23:29:45 CDT)
Windows Virus
- Markus Drumm (Tue Jul 24 2001 - 05:42:07 CDT)

Last message date: Sun Dec 30 2001 - 21:24:17 CST
Archived on: Thu May 05 2005 - 14:17:16 CDT

114 messages sorted by: [ author ] [ date ] [ thread ]
About this archive