AMBER Archive (2001)

Subject: odd display of ambpdb generated files

From: Jake Isaacs (rjisaa0_at_pop.uky.edu)
Date: Fri Apr 13 2001 - 15:20:39 CDT

When I use InsightII to view a pdb file created from prmtop and inpcrd via
ambpdb, multiple anomalous bonds appear. What might be the cause and
solution for this?

  .-. .-. .-. .-. .------------------------. .-. .-. .-. .-.
 /|||X|||\ /|||X|||\ / Jake Isaacs \ /|||X|||\ /|||X|||\
X|||/ \|||X|||/ \|||X Department of Molecular X|||/ \|||X|||/ \|||X
 `-' `-' `-' `-' \ & Cellular Biochemistry / `-' `-' `-' `-'
 .-. .-. .-. .-. / University of Kentucky \ .-. .-. .-. .-.
X|||\ /|||X|||\ /|||X 800 Rose St. X|||\ /|||X|||\ /|||X
 \|||X|||/ \|||X|||/ \ Lexington, KY 40536-0084 / \|||X|||/ \|||X|||/
  `-' `-' `-' `-' `------------------------' `-' `-' `-' `-'