AMBER Archive (1999)

Subject: nmode memory?

From: Jianxin Guo (jguo_at_zeeman.unmc.edu)
Date: Thu Dec 09 1999 - 17:21:40 CST

hello,
   I am trying to using nmode to minize a protein complex with around
2500 atoms. however, the calculation stopped. I also recompile the nmode
by increasing the size of MAXMEMX and MAXMEMI and change the dimension
size in forces.f from 1000,3000 to 3000,9000 respectively.
Would anyone please tell me how to overcome this problem? Or maybe this
system is too large to be calculated by nmode?
Thanks.
Jianxin