AMBER Archive (2004)

Subject: AMBER: want to generate ammonium ion..where to start?

From: Grace Li (w24li_at_student.cs.uwaterloo.ca)
Date: Tue Sep 14 2004 - 11:48:20 CDT

Dear AMBER users:

I want to have the ammonium ion (NH4 +) in my simulation, but I have no idea
how to create it.
Should I try to get a PDB for it?
How can I create a prep input file for the ammonium? if it's possible at
all?

Thanks,

Grace

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