AMBER Archive (2004)

Subject: AMBER: phosphorylated serin / histidin

From: Nadine Homeyer (nadine.homeyer_at_biochem.uni-erlangen.de)
Date: Thu Mar 25 2004 - 07:04:38 CST

Dear Amber users,

Can somebody tell me how to treat a phosphorylated serin or histidin in
AMBER. Has anybody calculated RESP charges for these phosphorylated
amino acids? Are there parameters for a terminal phosphate group in
Amber? The only phosphate group paramters I found, where those for
nuceotides, but I need parameters for a terminal phosphate group. Can
anybody tell me, where I can get these parameters?
Thanks for you help.

Yours sincerely.

Nadine

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