List of the Contents of the MD Directory (for Structure Calculations)

Please note: Not all of these files may be essential!

• 2d.inter.genxpk
• RM6noecount
• add90
• add90lm
• addtropp
• amb2iupac
• ambpdb
• changedihed
• checkconst
• chiral_defs
• cnvpdb
• constcount
• del90
• dg2habas
• dg2md
• di2am
• diana2habas
• dockall
• dockall_code
• dodomd
• domdprep.dimer
• domdprep.monomer
• domdprep.n56a
• dup7col
• dupaco
• duphbond
• fixbound
• fixhbondbounds
• fixnoe_md.cy
• fixnoeconvcomm
• garb
• habmdconv
• ifvari
• map.DG-AMBER
• map.DG-AMBER.ambi.old
• map.DIANA-AMBER
• map.DIANA-AMBER.orig
• map.atmnames
• mk_chir_cons
• n56a006.pdb
• noeconv
• noeconv_conv.cy
• noevio.pseudomap.mt
• noeviograb
• pdb2amber
• pdb_renumber
• postproctv
• protonate
• renumres
• rst2bcl
• rst2ins
• sample.dimer.pdb
• sample.dimer.pdb.lena
• sample.dimer.pdb.randy
• sample.monomer.pdb
• sample.monomer.pdb.lena
• sample.monomer.pdb.leper
• sample.monomer.pdb.randy
• sample.n56a.pdb
• sander.a41.hp
• sander.a42
• sander.a5
• senergy
• srst
• stddev
• sviol
• sviol.lm
• torvio2sig