AMBER Archive (2009)

Subject: Re: [AMBER] Output Does Not Match in Tutorial B1

From: case (case_at_biomaps.rutgers.edu)
Date: Mon Nov 30 2009 - 13:01:20 CST

On Mon, Nov 30, 2009, Wallace Kunin wrote:

> I am running Ubuntu 9.10 Karmic Koala. I am following the tutorial B1 and
> am at the point where I type model = loadpdb "nuc_ter.pdb". However, this
> does not give me the output in the tutorial with no errors. Instead, it
> looks very similar to when I loaded the nuc.pdb file earlier in the
> tutorial. I don't know how to copy the output into this message because
> there is no copy/paste functionality in xleap. Thanks all for your help.

Use tleap: then you are just in a terminal window and can use copy/paste
as usual. Also, try leaving out the quotation marks around nuc_ter.pdb.

...dac

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