AMBER Archive (2009)

Subject: Re: [AMBER] Segmentation fault in antechamber

From: case (case_at_biomaps.rutgers.edu)
Date: Tue Nov 17 2009 - 22:28:14 CST

On Tue, Nov 17, 2009, albert albert wrote:
>
> The pdb is linked.

The idea is that you give a pdb-formatted file for a *single residue* or a
small organic molecule to antechamber. It looks like you tried to feed it an
entire pdb file with several hundred residues(?). Of course, this should
provide a better error message, but it will never work.

[If, in fact, you did not send antechamber the entire file, then please give
explicit details of exactly what was done.]

...dac

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