AMBER Archive (2009)

Subject: [AMBER] stacking clusters

From: Shaikh Abdul R S Ramaju (smasarsr_at_nus.edu.sg)
Date: Thu Oct 29 2009 - 21:44:59 CDT

Dear Amber users,

 

I want to study the different clusters of arginine in solution. Is it
possible to study stacking cluster of arginine using ff03 force field. I
am not sure whether these force field is appropriate for such system as
dispersion interactions are needed for stacking kind of interaction.

 

Thanks in advance for kind suggestions.

 

Regards

Abdul Rajjak

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