AMBER Archive (2009)

Subject: Re: [AMBER] software to hydrate protein pockets

From: Hannes Kopitz (Hannes.Kopitz_at_gmx.de)
Date: Fri Oct 23 2009 - 08:11:26 CDT

Dear Vlad,

Maybe this helps: http://archive.ambermd.org/200902/0256.html

Cheers!
Hannes

-------- Original-Nachricht --------
> Datum: Fri, 23 Oct 2009 14:23:54 +0200
> Von: Vlad Cojocaru <Vlad.Cojocaru_at_eml-r.villa-bosch.de>
> An: AMBER list <amber_at_ambermd.org>
> Betreff: [AMBER] software to hydrate protein pockets

> Dear Amber users,
>
> Does anyone know a software (free for academics) to hydrate protein
> pockets ? To be more precise, I am interested in a program that can use
> the force field parameters (amber or other) and calculate favorable
> positions of waters inside close pockets in proteins or other types of
> molecules ...
>
> Thanks for any suggestions
> Best wishes
> Vlad
>
> --
> ----------------------------------------------------------------------------
> Dr. Vlad Cojocaru
>
> EML Research gGmbH
> Schloss-Wolfsbrunnenweg 33
> 69118 Heidelberg
>
> Tel: ++49-6221-533202
> Fax: ++49-6221-533298
>
> e-mail:Vlad.Cojocaru[at]eml-r.villa-bosch.de
>
> http://projects.villa-bosch.de/mcm/people/cojocaru/
>
> ----------------------------------------------------------------------------
> EML Research gGmbH
> Amtgericht Mannheim / HRB 337446
> Managing Partner: Dr. h.c. Klaus Tschira
> Scientific and Managing Director: Prof. Dr.-Ing. Andreas Reuter
> http://www.eml-r.org
> ----------------------------------------------------------------------------
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