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AMBER Archive (2009)Subject: [AMBER] How create PRMTOP and INCPRD for surface?
From: rrd (rrd_at_seznam.cz)
Hello,
I try simulate interaction between protein and surface. I have two surfaces for simulation, first is hydrophobic H-terminated diamond and second is hydrophilic OH-terminated diamond. But now, I don't know how make parametrization of these surfaces for Amber (get PRMTOP and INCPRD).
Thanks in advance,
Pavel.
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