AMBER Archive (2009)

Subject: RE: [AMBER] new process_mdout.pl script????

From: Ross Walker (ross_at_rosswalker.co.uk)
Date: Mon Oct 05 2009 - 13:38:17 CDT

Hi Dean,

>I can see that the md.out output of the sander I am using (amber10) is very
>different than the .out files files I see in Tutorial 1 at the ambermd.org
>site.

What do you mean by VERY different? The differences are minor and the script
works fine on my computer for output files generated with sander from
Versions 7 to 10. It also works fine with PMEMD. Are you sure you have a
sander or pmemd output file?

All the best
Ross

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|\oss Walker

| Assistant Research Professor |
| San Diego Supercomputer Center |
| Tel: +1 858 822 0854 | EMail:- ross_at_rosswalker.co.uk |
| http://www.rosswalker.co.uk | PGP Key available on request |

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