AMBER Archive (2009)

Subject: Re: [AMBER] minimization error

• Previous message: balaji nagarajan: "[AMBER] minimization error"
• In reply to: balaji nagarajan: "[AMBER] minimization error"
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On Fri, Oct 02, 2009, balaji nagarajan wrote:
>
> I have build a model for DNA junction.
>
> 2) when i do the minimization in vaccum it
> sander got stoped and it gave the following error
>
> ----------------------------------------------------------
> At line 1262 of file _ew_box.f
> Fortran runtime error: Bad value during integer read

Look at your input file: my guess is that you have an incorrect value for ntb;
note that the default value is 1.

Also, are you sure you want to doing a vacuum minimization for a DNA junction?

...dac

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• Previous message: balaji nagarajan: "[AMBER] minimization error"
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