AMBER Archive (2009)

Subject: Re: Re: [AMBER] No restrt file

From: case (case_at_biomaps.rutgers.edu)
Date: Wed Sep 30 2009 - 07:06:47 CDT

On Wed, Sep 30, 2009, null wrote:

> When I checked my min1.out ,I found a problem "VDWAALS = ************* "

Check your starting structure: you have two atoms on top of each other (or
very close in space). You can use the checkoverlap command in ptraj to help
find problems.

...dac

_______________________________________________
AMBER mailing list
AMBER_at_ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber