AMBER Archive (2009)

Subject: [AMBER] Zinc

From: Sel Ercan (slmrcn_at_ymail.com)
Date: Tue Sep 29 2009 - 16:26:53 CDT

Hi all.
I want to minimize 1WJD.pdb (hiv-1 integrase n-terminal domain). Loading pdb to xleap gives error about Zinc.
Xleap gives these three errrors:
FATAL: Atom .R<HIE 12>.A<HD1 18> does not have a type.
FATAL: Atom .R<ASP 55>.A<OXT 13> does not have a type.
FATAL: Atom .R<ZN 56>.A<ZN 1> does not have a type.
can anyone tell me what to do? Is there any force field for zinc?

      
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